bugAdun - Bugs: bug #18113, trajectory analysis plugin crashes...

 
 
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bug #18113: trajectory analysis plugin crashes Adun

Submitted by:  Jordi Villà-Freixa <jvilla>
Submitted on:  Mon 09 May 2011 04:34:05 AM UTC  
 
Category: GUISeverity: 4 - Important
Priority: 7 - HighStatus: None
Privacy: PublicAssigned to: None
Open/Closed: OpenRelease: None
Operating System: Mac OSPlanned Release: None

Mon 09 May 2011 10:10:54 AM UTC, comment #3:

The fact that its still running eliminates a couple of possibilities of what went wrong (I thought the simulation may have finished the exact moment you tried to run the plugin causing something unexpected to happen).

If you have the UL.log from after the crash could give some info - however I suspect it was overwritten when you relaunced the program.

Also you seem to have an old version of StepTalk installed. Can you recompile it and rerun the script?

Michael Johnston <mjohnston>
Project Administrator
Mon 09 May 2011 08:05:54 AM UTC, comment #2:

The simulation still seems to be running, indeed:
(exracted from top)
50433- AdunCore 199.1 125 hrs 3/2

repairing the database has no effect (see attached file for output of the script): when opening the Adun GUI again.

Tell me what log files you want to see

(file #12982)

Jordi Villà-Freixa <jvilla>
Project Administrator
Mon 09 May 2011 07:52:09 AM UTC, comment #1:

I'm not sure why the plugin crashed the interface - I've never tested it myself. The place where it crashed (finding the dimensions of the box that contains the simulated systems) is a strange one though. The plugin will probably need to be tested on running trajectories to see if this in general is the problem.

As for retrieving the trajectory, the problem is the way the plugin crashed the program. If the plugin had raised an exception (or you had just closed it) then the simulation would still be there when you returned. However because it was a BusError the program just immediately died and there was no chance to store the state of the program. We can get fix this by always storing info on running processes to disk as soon as they are launched.

btw Was the simulation still running after the plugin crashed? Also if you still have them, can you attach the output of the various logs at the time of the crash.

In general, if the simulation has finished/died and somehow had become completely detached from the interface (like in the above case) then you have to repair the database in order for the finished simulation to appear. To do this use the script RepairDatabaseIndex.st

RepairDatabaseIndex.st $ADUN_WORKING_DIR/Database/Simulations/SimulationIndex

Michael Johnston <mjohnston>
Project Administrator
Mon 09 May 2011 04:34:05 AM UTC, original submission:

Adun has been running for 4 days to produce a MD calculation with GB and when trying to analyze the results (still running the simulation) with the trajectory converter, the program crashes with the message below. After opening Adun, the simulation has disappeared from the table in the Adun UL.

Process: Adun [49900]
Path: /Users/jvilla/Applications/Adun.app/Contents/MacOS/Adun
Identifier: com.cbbl.Adun.UL
Version: ??? (0.83)
Code Type: X86 (Native)
Parent Process: launchd [29471]

Date/Time: 2011-05-09 06:29:57.590 +0200
OS Version: Mac OS X 10.6.7 (10J869)
Report Version: 6
Sleep/Wake UUID: F2FCA2B3-DFBA-4116-93D8-E0DCF52A5AC1

Interval Since Last Report: 292807 sec
Crashes Since Last Report: 3
Per-App Interval Since Last Report: 243508 sec
Per-App Crashes Since Last Report: 2
Anonymous UUID: A3D97885-F04D-495A-96DA-38F0B033FE72

Exception Type: EXC_BAD_ACCESS (SIGBUS)
Exception Codes: KERN_PROTECTION_FAILURE at 0x0000000000000000
Crashed Thread: 5

Thread 0: Dispatch queue: com.apple.main-thread

  1. libSystem.B.dylib 0x96b8109a mach_msg_trap + 10

1 libSystem.B.dylib 0x96b81807 mach_msg + 68
2 com.apple.CoreFoundation 0x90e2a37f __CFRunLoopRun + 2079
3 com.apple.CoreFoundation 0x90e29464 CFRunLoopRunSpecific + 452
4 com.apple.CoreFoundation 0x90e29291 CFRunLoopRunInMode + 97
5 com.apple.HIToolbox 0x950d7e04 RunCurrentEventLoopInMode + 392
6 com.apple.HIToolbox 0x950d7bb9 ReceiveNextEventCommon + 354
7 com.apple.HIToolbox 0x950d7a3e BlockUntilNextEventMatchingListInMode + 81
8 com.apple.AppKit 0x98f4c78d _DPSNextEvent + 847
9 com.apple.AppKit 0x98f4bfce -[NSApplication nextEventMatchingMask:untilDate:inMode:dequeue:] + 156
10 com.apple.AppKit 0x991c380d -[NSApplication _realDoModalLoop:peek:] + 720
11 com.apple.AppKit 0x991c2f89 -[NSApplication runModalForWindow:] + 273
12 com.cbbl.Adun.UL 0x0000730a -[ULAnalyser(ULAnalyserPluginExtensions) applyCurrentPlugin:] + 1192
13 com.apple.AppKit 0x9917ff58 -[NSToolbarButton sendAction:to:] + 100
14 com.apple.AppKit 0x9917fee9 -[NSToolbarButton sendAction] + 88
15 com.apple.AppKit 0x991688b7 -[NSToolbarItemViewer mouseDown:] + 4976
16 com.apple.AppKit 0x99061c68 -[NSWindow sendEvent:] + 5549
17 com.apple.AppKit 0x98f7a817 -[NSApplication sendEvent:] + 6431
18 com.apple.AppKit 0x98f0e2a7 -[NSApplication run] + 917
19 com.apple.AppKit 0x98f062d9 NSApplicationMain + 574
20 com.cbbl.Adun.UL 0x00002e33 _start + 209
21 com.cbbl.Adun.UL 0x00002d61 start + 41

Thread 1: Dispatch queue: com.apple.libdispatch-manager

  1. libSystem.B.dylib 0x96ba7922 kevent + 10

1 libSystem.B.dylib 0x96ba803c _dispatch_mgr_invoke + 215
2 libSystem.B.dylib 0x96ba74f9 _dispatch_queue_invoke + 163
3 libSystem.B.dylib 0x96ba729e _dispatch_worker_thread2 + 240
4 libSystem.B.dylib 0x96ba6d21 _pthread_wqthread + 390
5 libSystem.B.dylib 0x96ba6b66 start_wqthread + 30

Thread 2: com.apple.CFSocket.private

  1. libSystem.B.dylib 0x96ba0066 select$DARWIN_EXTSN + 10

1 com.apple.CoreFoundation 0x90e69c83 __CFSocketManager + 1091
2 libSystem.B.dylib 0x96bae7fd _pthread_start + 345
3 libSystem.B.dylib 0x96bae682 thread_start + 34

Thread 3:

  1. libSystem.B.dylib 0x96b8109a mach_msg_trap + 10

1 libSystem.B.dylib 0x96b81807 mach_msg + 68
2 com.apple.CoreFoundation 0x90e2a37f __CFRunLoopRun + 2079
3 com.apple.CoreFoundation 0x90e29464 CFRunLoopRunSpecific + 452
4 com.apple.CoreFoundation 0x90e29291 CFRunLoopRunInMode + 97
5 com.apple.Foundation 0x900886f4 +[NSURLConnection(NSURLConnectionReallyInternal) _resourceLoadLoop:] + 329
6 com.apple.Foundation 0x9004fad0 -[NSThread main] + 45
7 com.apple.Foundation 0x9004fa80 _NSThread__main_ + 1499
8 libSystem.B.dylib 0x96bae7fd _pthread_start + 345
9 libSystem.B.dylib 0x96bae682 thread_start + 34

Thread 4:

  1. libSystem.B.dylib 0x96ba69b2 __workq_kernreturn + 10

1 libSystem.B.dylib 0x96ba6f48 _pthread_wqthread + 941
2 libSystem.B.dylib 0x96ba6b66 start_wqthread + 30

Thread 5 Crashed:

  1. com.cbbl.Adun.AdunKernel 0x00050f78 -[AdCellListHandler(CellMaintainence) _locateCellSpaceBoundries] + 101 (AdunCellListHandler.m:1497)

1 com.cbbl.Adun.AdunKernel 0x00051aa7 -[AdCellListHandler(CellMaintainence) initialiseCells] + 100 (AdunCellListHandler.m:1704)
2 com.cbbl.Adun.AdunKernel 0x0004f606 -[AdCellListHandler createList] + 157 (AdunCellListHandler.m:397)
3 com.cbbl.Adun.AdunKernel 0x0007f141 -[AdPureNonbondedTerm setNonbondedPairs:] + 130 (AdunPureNonbondedTerm.m:1116)
4 com.cbbl.Adun.AdunKernel 0x0007d630 -[AdPureNonbondedTerm _privateInitWithSystem:cutoff:updateInterval:permittivity:nonbondedPairs:externalForceMatrix:listHandlerClass:] + 1038 (AdunPureNonbondedTerm.m:336)
5 com.cbbl.Adun.AdunKernel 0x0007d7fa -[AdPureNonbondedTerm initWithSystem:cutoff:updateInterval:permittivity:nonbondedPairs:externalForceMatrix:listHandlerClass:] + 220 (AdunPureNonbondedTerm.m:412)
6 com.cbbl.Adun.AdunKernel 0x0007d21c -[AdPureNonbondedTerm initWithSystem:cutoff:updateInterval:permittivity:nonbondedPairs:externalForceMatrix:] + 132 (AdunPureNonbondedTerm.m:241)
7 ...rcompany.TrajectoryAnalysis 0x15df83a1 -[TrajectoryAnalysis runAnalysisForIndizees:andIndizees:inputs:andOptions:] + 1630 (TrajectoryAnalysis.m:452)
8 ...rcompany.TrajectoryAnalysis 0x15df8f97 -[TrajectoryAnalysis processInputs:userOptions:] + 766 (TrajectoryAnalysis.m:642)
9 com.cbbl.Adun.ULFramework 0x00269c10 -[ULAnalysisManager applyPlugin:withOptions:error:] + 581
10 com.cbbl.Adun.UL 0x00006caf -[ULAnalyser(ULAnalyserPluginExtensions) _threadedApplyCurrentPlugin] + 633
11 com.apple.Foundation 0x9004fad0 -[NSThread main] + 45
12 com.apple.Foundation 0x9004fa80 _NSThread__main_ + 1499
13 libSystem.B.dylib 0x96bae7fd _pthread_start + 345
14 libSystem.B.dylib 0x96bae682 thread_start + 34

Thread 6:

  1. libSystem.B.dylib 0x96b8109a mach_msg_trap + 10

1 libSystem.B.dylib 0x96b81807 mach_msg + 68
2 com.apple.CoreFoundation 0x90e2a37f __CFRunLoopRun + 2079
3 com.apple.CoreFoundation 0x90e29464 CFRunLoopRunSpecific + 452
4 com.apple.CoreFoundation 0x90e29291 CFRunLoopRunInMode + 97
5 com.apple.Foundation 0x90089640 -[NSRunLoop(NSRunLoop) runMode:beforeDate:] + 279
6 com.cbbl.Adun.AdunKernel 0x000ab171 -[AdWorkerThread runWorker:] + 403 (AdunThreadManager.m:426)
7 com.apple.Foundation 0x9004fad0 -[NSThread main] + 45
8 com.apple.Foundation 0x9004fa80 _NSThread__main_ + 1499
9 libSystem.B.dylib 0x96bae7fd _pthread_start + 345
10 libSystem.B.dylib 0x96bae682 thread_start + 34

Thread 7:

  1. libSystem.B.dylib 0x96b8109a mach_msg_trap + 10

1 libSystem.B.dylib 0x96b81807 mach_msg + 68
2 com.apple.CoreFoundation 0x90e2a37f __CFRunLoopRun + 2079
3 com.apple.CoreFoundation 0x90e29464 CFRunLoopRunSpecific + 452
4 com.apple.CoreFoundation 0x90e29291 CFRunLoopRunInMode + 97
5 com.apple.Foundation 0x90089640 -[NSRunLoop(NSRunLoop) runMode:beforeDate:] + 279
6 com.cbbl.Adun.AdunKernel 0x000ab171 -[AdWorkerThread runWorker:] + 403 (AdunThreadManager.m:426)
7 com.apple.Foundation 0x9004fad0 -[NSThread main] + 45
8 com.apple.Foundation 0x9004fa80 _NSThread__main_ + 1499
9 libSystem.B.dylib 0x96bae7fd _pthread_start + 345
10 libSystem.B.dylib 0x96bae682 thread_start + 34

Thread 8:

  1. libSystem.B.dylib 0x96b8109a mach_msg_trap + 10

1 libSystem.B.dylib 0x96b81807 mach_msg + 68
2 com.apple.CoreFoundation 0x90e2a37f __CFRunLoopRun + 2079
3 com.apple.CoreFoundation 0x90e29464 CFRunLoopRunSpecific + 452
4 com.apple.CoreFoundation 0x90e29291 CFRunLoopRunInMode + 97
5 com.apple.Foundation 0x90089640 -[NSRunLoop(NSRunLoop) runMode:beforeDate:] + 279
6 com.cbbl.Adun.AdunKernel 0x000ab171 -[AdWorkerThread runWorker:] + 403 (AdunThreadManager.m:426)
7 com.apple.Foundation 0x9004fad0 -[NSThread main] + 45
8 com.apple.Foundation 0x9004fa80 _NSThread__main_ + 1499
9 libSystem.B.dylib 0x96bae7fd _pthread_start + 345
10 libSystem.B.dylib 0x96bae682 thread_start + 34

Thread 9:

  1. libSystem.B.dylib 0x96b8109a mach_msg_trap + 10

1 libSystem.B.dylib 0x96b81807 mach_msg + 68
2 com.apple.CoreFoundation 0x90e2a37f __CFRunLoopRun + 2079
3 com.apple.CoreFoundation 0x90e29464 CFRunLoopRunSpecific + 452
4 com.apple.CoreFoundation 0x90e29291 CFRunLoopRunInMode + 97
5 com.apple.Foundation 0x90089640 -[NSRunLoop(NSRunLoop) runMode:beforeDate:] + 279
6 com.cbbl.Adun.AdunKernel 0x000ab171 -[AdWorkerThread runWorker:] + 403 (AdunThreadManager.m:426)
7 com.apple.Foundation 0x9004fad0 -[NSThread main] + 45
8 com.apple.Foundation 0x9004fa80 _NSThread__main_ + 1499
9 libSystem.B.dylib 0x96bae7fd _pthread_start + 345
10 libSystem.B.dylib 0x96bae682 thread_start + 34

Thread 10:

  1. libSystem.B.dylib 0x96b8109a mach_msg_trap + 10

1 libSystem.B.dylib 0x96b81807 mach_msg + 68
2 com.apple.CoreFoundation 0x90e2a37f __CFRunLoopRun + 2079
3 com.apple.CoreFoundation 0x90e29464 CFRunLoopRunSpecific + 452
4 com.apple.CoreFoundation 0x90e29291 CFRunLoopRunInMode + 97
5 com.apple.Foundation 0x90089640 -[NSRunLoop(NSRunLoop) runMode:beforeDate:] + 279
6 com.cbbl.Adun.AdunKernel 0x000ab171 -[AdWorkerThread runWorker:] + 403 (AdunThreadManager.m:426)
7 com.apple.Foundation 0x9004fad0 -[NSThread main] + 45
8 com.apple.Foundation 0x9004fa80 _NSThread__main_ + 1499
9 libSystem.B.dylib 0x96bae7fd _pthread_start + 345
10 libSystem.B.dylib 0x96bae682 thread_start + 34

Thread 11:

  1. libSystem.B.dylib 0x96b8109a mach_msg_trap + 10

1 libSystem.B.dylib 0x96b81807 mach_msg + 68
2 com.apple.CoreFoundation 0x90e2a37f __CFRunLoopRun + 2079
3 com.apple.CoreFoundation 0x90e29464 CFRunLoopRunSpecific + 452
4 com.apple.CoreFoundation 0x90e29291 CFRunLoopRunInMode + 97
5 com.apple.Foundation 0x90089640 -[NSRunLoop(NSRunLoop) runMode:beforeDate:] + 279
6 com.cbbl.Adun.AdunKernel 0x000ab171 -[AdWorkerThread runWorker:] + 403 (AdunThreadManager.m:426)
7 com.apple.Foundation 0x9004fad0 -[NSThread main] + 45
8 com.apple.Foundation 0x9004fa80 _NSThread__main_ + 1499
9 libSystem.B.dylib 0x96bae7fd _pthread_start + 345
10 libSystem.B.dylib 0x96bae682 thread_start + 34

Thread 12:

  1. libSystem.B.dylib 0x96b8109a mach_msg_trap + 10

1 libSystem.B.dylib 0x96b81807 mach_msg + 68
2 com.apple.CoreFoundation 0x90e2a37f __CFRunLoopRun + 2079
3 com.apple.CoreFoundation 0x90e29464 CFRunLoopRunSpecific + 452
4 com.apple.CoreFoundation 0x90e29291 CFRunLoopRunInMode + 97
5 com.apple.Foundation 0x90089640 -[NSRunLoop(NSRunLoop) runMode:beforeDate:] + 279
6 com.cbbl.Adun.AdunKernel 0x000ab171 -[AdWorkerThread runWorker:] + 403 (AdunThreadManager.m:426)
7 com.apple.Foundation 0x9004fad0 -[NSThread main] + 45
8 com.apple.Foundation 0x9004fa80 _NSThread__main_ + 1499
9 libSystem.B.dylib 0x96bae7fd _pthread_start + 345
10 libSystem.B.dylib 0x96bae682 thread_start + 34

Thread 5 crashed with X86 Thread State (32-bit):
eax: 0x00000000 ebx: 0x00050f24 ecx: 0x00000000 edx: 0x1fb65cc0
edi: 0x1fb656d0 esi: 0x13bf1e00 ebp: 0xb01958d8 esp: 0xb0195860
ss: 0x0000001f efl: 0x00010297 eip: 0x00050f78 cs: 0x00000017
ds: 0x0000001f es: 0x0000001f fs: 0x0000001f gs: 0x00000037
cr2: 0x00000000

Binary Images:
0x1000 - 0x30ff7 +com.cbbl.Adun.UL ??? (0.83) <BE3F81BF-50BD-B044-94B1-87659BF97847> /Users/jvilla/Applications/Adun.app/Contents/MacOS/Adun
0x47000 - 0x179ff7 +com.cbbl.Adun.AdunKernel ??? (0.16) <63A23748-5B03-BBC8-5E11-A50404F1551D> /Users/jvilla/Library/Frameworks/AdunKernel.framework/Versions/A/AdunKernel
0x242000 - 0x2dcff7 +com.cbbl.Adun.ULFramework ??? (0.83) <BB790CBB-796D-862D-C7D8-7FADBAB0F139> /Users/jvilla/Library/Frameworks/ULFramework.framework/Versions/A/ULFramework
0x32c000 - 0x331ff7 +com.yourcompany.StepTalkKit ??? (1.0) <00A14734-FB01-4797-7539-94547F08D507> /Users/jvilla/Library/Frameworks/StepTalkKit.framework/Versions/A/StepTalkKit
0x336000 - 0x34aff7 +StepTalk ??? (???) <D0105787-35D9-9DA1-D751-59F874327F80> /Users/jvilla/Library/Frameworks/StepTalk.framework/Versions/A/StepTalk
0x365000 - 0x39aff7 +libgnustep-baseadd.dylib.1.18 1.18.0 (compatibility 0.0.0) <09A87346-AA37-A2DC-ABFE-F629B18DB983> /usr/local/lib/libgnustep-baseadd.dylib.1.18
0x3c7000 - 0x3ebff7 +com.cbbl.Adun.MolTalk ??? (3.2) <3BAA1D57-20A2-E49A-68BD-945FBE8C1C6B> /Users/jvilla/Library/Frameworks/MolTalk.framework/Versions/A/MolTalk
0x402000 - 0x415fff +org.andymatuschak.Sparkle 1.5 Beta 6 (313) <5DF2B8A3-560D-4500-6B85-4215644DE532> /Library/Frameworks/Sparkle.framework/Versions/A/Sparkle
0x423000 - 0x427ff7 +com.yourcompany.FFML 1.0 (0.83) <095AC9D1-7D75-6B5D-F99F-EC03D995884C> /Users/jvilla/Library/Frameworks/FFML.framework/Versions/A/FFML
0x42e000 - 0x4e3fe7 libcrypto.0.9.7.dylib 0.9.7 (compatibility 0.9.7) <0B69B1F5-3440-B0BF-957F-E0ADD49F13CB> /usr/lib/libcrypto.0.9.7.dylib
0x7f4000 - 0x7f4ffc +com.yourcompany.Foundation ??? (1.0) <5835C9AE-6E45-C503-394C-84BD4A2AEF35> /Users/jvilla/Library/StepTalk/Bundles/Foundation.bundle/Contents/MacOS/Foundation
0x7f9000 - 0x7fafff +com.yourcompany.ObjectiveC ??? (1.0) <6F3EEE40-5747-3F1A-B698-D62A7508AE0B> /Users/jvilla/Library/StepTalk/Bundles/ObjectiveC.bundle/Contents/MacOS/ObjectiveC
0x137c2000 - 0x137cbffe +com.yourcompany.AppKit ??? (1.0) <E1C5352F-7DAB-2A7B-0EB9-FE75E2EBD233> /Users/jvilla/Library/Frameworks/StepTalk.framework/Modules/AppKit.bundle/Contents/MacOS/AppKit
0x145f9000 - 0x145fbff7 +com.cbbl.Adun.ConformationConverter ??? (0.83) <F6AD96E2-F07F-AB74-FA9F-8FD898209341> /Users/jvilla/Library/Adun/Analysis/ConformationConverter.bundle/Contents/MacOS/ConformationConverter
0x147c8000 - 0x147cdff7 +com.cbbl.Adun.EnergyConverter ??? (0.83) <129507E2-7B81-DA3F-788B-C595CAAA8BE3> /Users/jvilla/Library/Adun/Analysis/EnergyConverter.bundle/Contents/MacOS/EnergyConverter
0x147d5000 - 0x147d7ff7 +com.cbbl.Adun.PDBInfo ??? (0.83) <9E04AFB9-B621-6864-B561-FC41AFFEEF7D> /Users/jvilla/Library/Adun/Analysis/PDBInfo.bundle/Contents/MacOS/PDBInfo
0x147dc000 - 0x147e0ff7 +com.cbbl.Adun.SystemAnalysis ??? (0.83) <0A5F341E-7C0C-8F18-8CF2-72F80D83A479> /Users/jvilla/Library/Adun/Analysis/SystemAnalysis.bundle/Contents/MacOS/SystemAnalysis
0x148f7000 - 0x148fbff7 +com.cbbl.Adun.AddHydrogens ??? (0.82) <37CAEAEA-F8BD-087B-F072-18B13ACA1DDD> /Users/jvilla/Library/Adun/Configurations/AddHydrogens.bundle/Contents/MacOS/AddHydrogens
0x15ae9000 - 0x15aebff7 +com.cbbl.Adun.CAlphaDistance ??? (0.8) <5C6D386E-385D-2FB7-EE9C-216160CD0E4A> /Users/jvilla/.adun/Plugins/Analysis/CAlphaDistance.bundle/Contents/MacOS/CAlphaDistance
0x15af0000 - 0x15af2ff7 +com.cbbl.Adun.EssentialMovie ??? (0.32) <A31C6EC8-8AAA-4F05-E784-552FFF633CE2> /Users/jvilla/.adun/Plugins/Analysis/EssentialMovie.bundle/Contents/MacOS/EssentialMovie
0x15af7000 - 0x15afbff7 +com.yourcompany.LIE 1.0 (1) <41A981C7-0960-6CB4-793F-C1C4F1F9399A> /Users/jvilla/.adun/Plugins/Analysis/LIE.bundle/Contents/MacOS/LIE
0x15dae000 - 0x15dbfff7 +com.cbbl.Adun.Correlation ??? (0.2) <85CA89C2-4A01-DB7F-E030-780CDD067440> /Users/jvilla/.adun/Plugins/Analysis/Correlation.bundle/Contents/MacOS/Correlation
0x15dce000 - 0x15dd8ff7 +com.cbbl.Adun.NativeContacts ??? (0.11) <2228D1DA-9618-3A1E-4DCB-C6946CAD585B> /Users/jvilla/.adun/Plugins/Analysis/NativeContacts.bundle/Contents/MacOS/NativeContacts
0x15de0000 - 0x15de2ff7 +com.cbbl.Adun.RMSD ??? (0.81) <7CD187CB-35F9-2C01-C11C-7A7077042D01> /Users/jvilla/.adun/Plugins/Analysis/RMSD.bundle/Contents/MacOS/RMSD
0x15de7000 - 0x15debff7 +com.cbbl.Adun.RMSDMatrix ??? (0.4) <212E9619-5418-A32A-1C33-C08C1750EF12> /Users/jvilla/.adun/Plugins/Analysis/RMSDMatrix.bundle/Contents/MacOS/RMSDMatrix
0x15df0000 - 0x15df1ff7 +com.cbbl.Adun.Superimpose ??? (0.2) <08894C99-3E06-CA49-81D0-FC6A8E9F0E2F> /Users/jvilla/.adun/Plugins/Analysis/Superimpose.bundle/Contents/MacOS/Superimpose
0x15df5000 - 0x15df9ff7 +com.yourcompany.TrajectoryAnalysis 1.0 (1) <B25D694A-4E0A-4DC5-C783-97B3D13CC8A1> /Users/jvilla/.adun/Plugins/Analysis/TrajectoryAnalysis.bundle/Contents/MacOS/TrajectoryAnalysis
0x15f40000 - 0x15fc4fe7 com.apple.xquery 1.3 (29) <50F6142C-7E17-D926-8D92-DD1ED86C3406> /System/Library/PrivateFrameworks/XQuery.framework/XQuery
0x16fb2000 - 0x16fd4ff7 +com.cbbl.Adun.EssentialDynamics ??? (0.8) <4AE432AC-E4B7-C548-A5C8-166DBFA11BC1> /Users/jvilla/.adun/Plugins/Analysis/EssentialDynamics.bundle/Contents/MacOS/EssentialDynamics
0x8fe00000 - 0x8fe4162b dyld 132.1 (???) <A4F6ADCC-6448-37B4-ED6C-ABB2CD06F448> /usr/lib/dyld
0x90003000 - 0x90011fe7 libz.1.dylib 1.2.3 (compatibility 1.0.0) <3CE8AA79-F077-F1B0-A039-9103A4A02E92> /usr/lib/libz.1.dylib
0x90039000 - 0x902acfe7 com.apple.Foundation 6.6.6 (751.53) <C73FDD37-000B-C505-FD8D-80D1C9D17965> /System/Library/Frameworks/Foundation.framework/Versions/C/Foundation
0x902ad000 - 0x90348ff7 com.apple.ApplicationServices.ATS 275.15.1 (???) <FD63F92B-8DDE-4DBA-A7A5-0294E3607083> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ATS.framework/Versions/A/ATS
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0x96da9000 - 0x96df2fe7 libTIFF.dylib ??? (???) <5CE284EC-F637-EDBB-FDB3-61E86407CBB8> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libTIFF.dylib
0x96df3000 - 0x96e44ff7 com.apple.HIServices 1.8.2 (???) <F6EAC2D1-902A-9374-FC4B-43B50E054416> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/HIServices.framework/Versions/A/HIServices
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0x96f8a000 - 0x97779557 com.apple.CoreGraphics 1.545.0 (???) <8A4CB0D9-1001-0F62-4DA4-B8AB3B45E226> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/CoreGraphics.framework/Versions/A/CoreGraphics
0x9780c000 - 0x97824ff7 com.apple.CFOpenDirectory 10.6 (10.6) <F9AFC571-3539-6B46-ABF9-46DA2B608819> /System/Library/Frameworks/OpenDirectory.framework/Versions/A/Frameworks/CFOpenDirectory.framework/Versions/A/CFOpenDirectory
0x97825000 - 0x97826ff7 com.apple.TrustEvaluationAgent 1.1 (1) <6C04C4C5-667E-2EBE-EB96-5B67BD4B2185> /System/Library/PrivateFrameworks/TrustEvaluationAgent.framework/Versions/A/TrustEvaluationAgent
0x97834000 - 0x97867ff3 libTrueTypeScaler.dylib ??? (???) <E5E16584-870F-CBCD-F861-3BB45324DE16> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ATS.framework/Versions/A/Resources/libTrueTypeScaler.dylib
0x978af000 - 0x979bbff7 libGLProgrammability.dylib ??? (???) <2D172B4E-432F-D18E-EA99-3BD56DBE7649> /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLProgrammability.dylib
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0x979d8000 - 0x97a75fe3 com.apple.LaunchServices 362.2 (362.2) <F3952CAB-322F-A12F-57AF-8B91B1D76DDE> /System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/LaunchServices.framework/Versions/A/LaunchServices
0x97d70000 - 0x98229ffb com.apple.VideoToolbox 0.484.20 (484.20) <E7B9F015-2569-43D7-5268-375ED937ECA5> /System/Library/PrivateFrameworks/VideoToolbox.framework/Versions/A/VideoToolbox
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0x98829000 - 0x98a27ff3 com.apple.JavaScriptCore 6533.20 (6533.20.20) <C97A479C-FDF9-3F19-2EE0-80288257C477> /System/Library/Frameworks/JavaScriptCore.framework/Versions/A/JavaScriptCore
0x98a28000 - 0x98a4fff7 com.apple.quartzfilters 1.6.0 (1.6.0) <879A3B93-87A6-88FE-305D-DF1EAED04756> /System/Library/Frameworks/Quartz.framework/Versions/A/Frameworks/QuartzFilters.framework/Versions/A/QuartzFilters
0x98a83000 - 0x98a8aff3 com.apple.print.framework.Print 6.1 (237.1) <F5AAE53D-5530-9004-A9E3-2C1690C5328E> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Print.framework/Versions/A/Print
0x98a8b000 - 0x98aacfe7 com.apple.opencl 12.3.6 (12.3.6) <B4104B80-1CB3-191C-AFD3-697843C6BCFF> /System/Library/Frameworks/OpenCL.framework/Versions/A/OpenCL
0x98aad000 - 0x98ab1ff7 IOSurface ??? (???) <D849E1A5-6B0C-2A05-2765-850EC39BA2FF> /System/Library/Frameworks/IOSurface.framework/Versions/A/IOSurface
0x98aea000 - 0x98aeaff7 com.apple.vecLib 3.6 (vecLib 3.6) <7362077A-890F-3AEF-A8AB-22247B10E106> /System/Library/Frameworks/vecLib.framework/Versions/A/vecLib
0x98aeb000 - 0x98aebff7 com.apple.CoreServices 44 (44) <51CFA89A-33DB-90ED-26A8-67D461718A4A> /System/Library/Frameworks/CoreServices.framework/Versions/A/CoreServices
0x98aec000 - 0x98afdff7 com.apple.LangAnalysis 1.6.6 (1.6.6) <97511CC7-FE23-5AC3-2EE2-B5479FAEB316> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/LangAnalysis.framework/Versions/A/LangAnalysis
0x98afe000 - 0x98b3fff7 libRIP.A.dylib 545.0.0 (compatibility 64.0.0) <95079B56-0B7B-F114-5C43-5220DBE0FBB1> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/CoreGraphics.framework/Versions/A/Resources/libRIP.A.dylib
0x98b4c000 - 0x98b4eff7 com.apple.securityhi 4.0 (36638) <38D36D4D-C798-6ACE-5FA8-5C001993AD6B> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/SecurityHI.framework/Versions/A/SecurityHI
0x98b4f000 - 0x98ba5ff7 com.apple.MeshKitRuntime 1.1 (49.2) <F1EAE9EC-2DA3-BAFD-0A8C-6A3FFC96D728> /System/Library/PrivateFrameworks/MeshKit.framework/Versions/A/Frameworks/MeshKitRuntime.framework/Versions/A/MeshKitRuntime
0x98c16000 - 0x98c24ff7 com.apple.opengl 1.6.12 (1.6.12) <81AEF74E-E33A-B021-9CDB-6199104105FF> /System/Library/Frameworks/OpenGL.framework/Versions/A/OpenGL
0x98c25000 - 0x98c29ff7 libGIF.dylib ??? (???) <447BC6E8-4C56-3D5D-983B-6BEA0D26F319> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libGIF.dylib
0x98c2a000 - 0x98cfbfe3 ColorSyncDeprecated.dylib 4.6.0 (compatibility 1.0.0) <41417F73-42C5-FFC3-E7A1-EF94602CDCD6> /System/Library/Frameworks/ApplicationServices.framework/Frameworks/ColorSync.framework/Versions/A/Resources/ColorSyncDeprecated.dylib
0x98f04000 - 0x997e4ff7 com.apple.AppKit 6.6.7 (1038.35) <ABC7783C-E4D5-B848-BED6-99451D94D120> /System/Library/Frameworks/AppKit.framework/Versions/C/AppKit
0x998c7000 - 0x9990dff7 libauto.dylib ??? (???) <29422A70-87CF-10E2-CE59-FEE1234CFAAE> /usr/lib/libauto.dylib
0x9992d000 - 0x99991ffb com.apple.htmlrendering 72 (1.1.4) <4D451A35-FAB6-1288-71F6-F24A4B6E2371> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/HTMLRendering.framework/Versions/A/HTMLRendering
0x99992000 - 0x999b4fef com.apple.DirectoryService.Framework 3.6 (621.11) <CA979EAC-9537-43B6-CD69-C144ACB75E09> /System/Library/Frameworks/DirectoryService.framework/Versions/A/DirectoryService
0x999b5000 - 0x99a71fff com.apple.ColorSync 4.6.6 (4.6.6) <D00B95AE-2379-CB8E-B18C-FF5B66741C23> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ColorSync.framework/Versions/A/ColorSync
0x99a72000 - 0x99ae0ff7 com.apple.QuickLookUIFramework 2.3 (327.6) <74706A08-5399-24FE-00B2-4A702A6B83C1> /System/Library/Frameworks/Quartz.framework/Versions/A/Frameworks/QuickLookUI.framework/Versions/A/QuickLookUI
0xbb100000 - 0xbb103fe7 libLatinSuppConverter.dylib 49.0.0 (compatibility 1.0.0) <80CA35C5-AFBF-DD2D-B47B-9CE773B9CAEF> /System/Library/CoreServices/Encodings/libLatinSuppConverter.dylib
0xffff0000 - 0xffff1fff libSystem.B.dylib ??? (???) <ADF8138B-2384-2FC0-CCBF-C4721B53568A> /usr/lib/libSystem.B.dylib

Model: MacPro3,1, BootROM MP31.006C.B05, 8 processors, Quad-Core Intel Xeon, 2.8 GHz, 8 GB, SMC 1.25f4
Graphics: ATI Radeon HD 2600 XT, ATI Radeon HD 2600, PCIe, 256 MB
Memory Module: global_name
Bluetooth: Version 2.4.0f1, 2 service, 12 devices, 1 incoming serial ports
Network Service: Ethernet 2, Ethernet, en1
PCI Card: ATI Radeon HD 2600, Display, Slot-1
Serial ATA Device: WDC WD3200AAJS-41VWA1, 298.09 GB
Parallel ATA Device: PIONEER DVD-RW DVR-112D
USB Device: Keyboard Hub, 0x05ac (Apple Inc.), 0x1006, 0xfd500000
USB Device: Apple Optical USB Mouse, 0x05ac (Apple Inc.), 0x0304, 0xfd530000
USB Device: Apple Keyboard, 0x05ac (Apple Inc.), 0x0221, 0xfd520000
USB Device: Bluetooth USB Host Controller, 0x05ac (Apple Inc.), 0x8206, 0x5d200000
FireWire Device: built-in_hub, Up to 800 Mb/sec

Jordi Villà-Freixa <jvilla>
Project Administrator

 

Attached Files
file #12982:  kk added by jvilla (34kB - application/octet-stream - output of the RepairDatabaseIndex.st script)

 

Depends on the following items: None found

Items that depend on this one: None found

 

Carbon-Copy List
  • -unavailable- added by mjohnston (Posted a comment)
  • -unavailable- added by jvilla (Submitted the item)
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    Follows 1 latest change.

    Date Changed By Updated Field Previous Value => Replaced By
    Mon 09 May 2011 08:05:54 AM UTCjvillaAttached File-=>Added kk, #12982
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