bugrelax - Bugs: bug #21344, Handling of in sparse acquired...

 
 
Show feedback again

bug #21344: Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

Submitted by:  Troels E. Linnet <tlinnet>
Submitted on:  Fri 13 Dec 2013 01:36:36 PM UTC  
 
Category: relax's source codeSpecific analysis category: Relaxation dispersion
Priority: 5 - NormalSeverity: 3 - Normal
Status: FixedAssigned to: Troels E. Linnet <tlinnet>
Originator Name: Open/Closed: Closed
Release: 3.1.6Operating System: All systems

Add a New Comment (Rich MarkupRich Markup):
   

You are not logged in

Please log in, so followups can be emailed to you.

 

(Jump to the original submission Jump to the original submission)

Tue 18 Mar 2014 03:55:39 PM UTC, SVN revision 22503:

Merged revisions 22391-22483 via svnmerge from
svn+ssh://bugman@svn.gna.org/svn/relax/trunk

........
r22391 | tlinnet | 2014-03-03 12:47:14 +0100 (Mon, 03 Mar 2014) | 3 lines

Added ":" to dictionary keys to match return from spin_loop in systemtest Relax_disp.test_r1rho_kjaergaard.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.
........
r22392 | tlinnet | 2014-03-03 12:47:25 +0100 (Mon, 03 Mar 2014) | 3 lines

Removed model 'No Rex" to be tested in systemtest Relax_disp.test_r1rho_kjaergaard.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.
........
r22393 | tlinnet | 2014-03-03 12:47:34 +0100 (Mon, 03 Mar 2014) | 3 lines

Aliased spins in system test Relax_disp.test_r1rho_kjaergaard.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.
........
r22394 | tlinnet | 2014-03-03 12:47:42 +0100 (Mon, 03 Mar 2014) | 3 lines

Set opt_func_tol = 1e-15 and opt_max_iterations = 100000 to run system test Relax_disp.test_r1rho_kjaergaard faster.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.
........
r22395 | tlinnet | 2014-03-03 12:47:50 +0100 (Mon, 03 Mar 2014) | 3 lines

Re-ordered code-lines in system test Relax_disp.test_r1rho_kjaergaard.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.
........
r22396 | tlinnet | 2014-03-03 12:48:00 +0100 (Mon, 03 Mar 2014) | 3 lines

Assigned guess values for system test Relax_disp.test_r1rho_kjaergaard.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.
........
r22397 | bugman | 2014-03-03 14:51:08 +0100 (Mon, 03 Mar 2014) | 5 lines

Added a section at the start of the dispersion GUI analysis tutorial about 'computation time'.

This is for the dispersion chapter of the manual.
........
r22398 | bugman | 2014-03-04 15:36:46 +0100 (Tue, 04 Mar 2014) | 6 lines

Typo fix for text in the model-free GUI auto-analysis.

The maximum iterations for the protocol was misspelled in the GUI. This was spotted by Hessam

[...] Nasrollah.

[...]........

[...] r22399 | bugman | 2014-03-04 16:22:01 +0100 (Tue, 04 Mar 2014) | 6 lines

[...]

[...] Fix for one of the frame order system tests when using the Mac OS X application binary.

[...]

[...] The problem was that the 'shared_data' directory could not be found as it was not included in the

[...] test_suite package _all_ list.

[...]........

[...] r22400 | tlinnet | 2014-03-05 07:44:22 +0100 (Wed, 05 Mar 2014) | 3 lines

[...]

[...] Removed alias of spins in system test Relax_disp.test_r1rho_kjaergaard.

[...]

[...] Work in progress for Bug #21344, (https://gna.org/bugs/?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

[...]........

[...] r22401 | tlinnet | 2014-03-05 16:34:48 +0100 (Wed, 05 Mar 2014) | 5 lines

[...]

[...] Added fitted R1 values from paper to systemtest Relax_disp.test_r1rho_kjaergaard.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]

[...] This will be used to test the output of calculating Omega_eff, as stated in http://article.gmane.org/gmane.science.nmr.relax.devel/5148.

[...]........

[...] r22402 | tlinnet | 2014-03-05 16:34:50 +0100 (Wed, 05 Mar 2014) | 3 lines

[...]

[...] Added reading of R1 values in systemtest Relax_disp.test_r1rho_kjaergaard.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22403 | tlinnet | 2014-03-05 16:34:52 +0100 (Wed, 05 Mar 2014) | 3 lines

[...]

[...] Added full manual steps of analysis for systemtest Relax_disp.test_r1rho_kjaergaard.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22404 | tlinnet | 2014-03-05 16:43:46 +0100 (Wed, 05 Mar 2014) | 3 lines

[...]

[...] Modified the directory sepatort from "/" to os.sep in systemtest Relax_disp.test_r1rho_kjaergaard.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22405 | bugman | 2014-03-05 17:21:13 +0100 (Wed, 05 Mar 2014) | 9 lines

[...]

[...] Fix for bug #21754 (https://gna.org/bugs/?21754).

[...]

[...] This is the failure of the grace.view user function on MS Windows in opening a file in qtgrace when

[...] the path includes spaces, as reported by Mengjun Xue (mengjun dott xue att mailbox dott tu-berlin

[...] dott de).

[...]

[...] The fix was to run the program with the file name in double quotes.

[...]........

[...] r22406 | tlinnet | 2014-03-05 18:54:21 +0100 (Wed, 05 Mar 2014) | 3 lines

[...]

[...] Commented out the commands for writing of text files and state files to speed up system test Relax_disp.test_r1rho_kjaergaard.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22407 | tlinnet | 2014-03-05 18:54:26 +0100 (Wed, 05 Mar 2014) | 3 lines

[...]

[...] Added the testing of writing out theta values in systemtest Relax_disp.test_r1rho_kjaergaard.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22408 | tlinnet | 2014-03-05 18:54:28 +0100 (Wed, 05 Mar 2014) | 3 lines

[...]

[...] Added param "theta" to specific_analyses/relax_disp/api.py.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22409 | tlinnet | 2014-03-05 18:54:29 +0100 (Wed, 05 Mar 2014) | 3 lines

[...]

[...] Modified parameter py_type to dict() for the theta value.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22410 | tlinnet | 2014-03-05 18:54:31 +0100 (Wed, 05 Mar 2014) | 3 lines

[...]

[...] Added line to write out theta values to homedir for testing purposes.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22411 | tlinnet | 2014-03-05 18:54:33 +0100 (Wed, 05 Mar 2014) | 3 lines

[...]

[...] Added parameter "theta" do description tables.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22412 | tlinnet | 2014-03-05 18:54:34 +0100 (Wed, 05 Mar 2014) | 3 lines

[...]

[...] Made an assertion that spin contains attribute "theta" in systemtest Relax_disp.test_r1rho_kjaergaard.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22413 | tlinnet | 2014-03-06 00:01:17 +0100 (Thu, 06 Mar 2014) | 3 lines

[...]

[...] Removed the writiung of test file to home folder in systemtest Relax_disp.test_r1rho_kjaergaard.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22414 | tlinnet | 2014-03-06 17:11:18 +0100 (Thu, 06 Mar 2014) | 5 lines

[...]

[...] Added unit test for return_offset_data.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]

[...] This is development according to thread http://thread.gmane.org/gmane.science.nmr.relax.devel/5157.

[...]........

[...] r22415 | tlinnet | 2014-03-06 17:11:20 +0100 (Thu, 06 Mar 2014) | 3 lines

[...]

[...] Commented out the expectation of the attribute "theta" to exist in systemtest Relax_disp.test_r1rho_kjaergaard.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22416 | tlinnet | 2014-03-06 17:28:21 +0100 (Thu, 06 Mar 2014) | 3 lines

[...]

[...] Imported return_param_key_from_data to be used in unit test return_offset_data.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22417 | bugman | 2014-03-06 17:51:41 +0100 (Thu, 06 Mar 2014) | 6 lines

[...]

[...] The relax information printout, from "relax -i" for example, now includes detailed CPU information.

[...]

[...] This uses operating system specific commands to obtain this information which is not available from

[...] the platform Python module.

[...]........

[...] r22418 | bugman | 2014-03-06 18:09:31 +0100 (Thu, 06 Mar 2014) | 5 lines

[...]

[...] Removed the dependence on subprocess.check_output() as this is only for Python 2.7 and higher.

[...]

[...] This is for the relax information printout about the CPU info recently introduced.

[...]........

[...] r22419 | bugman | 2014-03-06 18:13:08 +0100 (Thu, 06 Mar 2014) | 3 lines

[...]

[...] Fix for the relax information printout on Mac OS X.

[...]........

[...] r22420 | bugman | 2014-03-06 19:30:06 +0100 (Thu, 06 Mar 2014) | 9 lines

[...]

[...] Fix for bug #21763 (https://gna.org/bugs/?21763).

[...]

[...] This is the problem of the chi2 value not being visible in the parameter list of the grace.write and

[...] value.write user functions in the GUI.

[...]

[...] The problem was that when asking for the parameter name list, the minimisation parameters were not

[...] being asked for.

[...]........

[...] r22421 | bugman | 2014-03-06 19:47:16 +0100 (Thu, 06 Mar 2014) | 6 lines

[...]

[...] The RAM in the relax information printout is now displayed for Mac OS X.

[...]

[...] The 'sysctl' command is now being used to retrieve the RAM size and total memory, and the swap is

[...] calculated as the difference.

[...]........

[...] r22422 | bugman | 2014-03-06 21:26:52 +0100 (Thu, 06 Mar 2014) | 5 lines

[...]

[...] Added the OMP relaxation rates and compressed PDB file to the repository.

[...]

[...] This is to allow users to have a full data set to perform a test model-free analysis with.

[...]........

[...] r22423 | tlinnet | 2014-03-06 22:45:14 +0100 (Thu, 06 Mar 2014) | 5 lines

[...]

[...] Removed import of: from specific_analyses.relax_disp.disp_data import return_param_key_from_data in unit test.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]

[...] This import is not needed.

[...]........

[...] r22424 | tlinnet | 2014-03-06 22:45:21 +0100 (Thu, 06 Mar 2014) | 5 lines

[...]

[...] Added a sample_script to generate theta values for R1rho data.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]

[...] The script is explained at the wiki: http://wiki.nmr-relax.com/Sample_scripts.relax_disp.return_offset_data

[...]........

[...] r22425 | bugman | 2014-03-07 11:17:49 +0100 (Fri, 07 Mar 2014) | 6 lines

[...]

[...] Created a new citation for relax which concatenates both the d'Auvergne and Gooley 2008 papers.

[...]

[...] This is to show to those who are unaware of back-to-back paper concatenation rules how to cite both

[...] papers using one reference, saving a lot of space.

[...]........

[...] r22426 | bugman | 2014-03-07 11:19:57 +0100 (Fri, 07 Mar 2014) | 3 lines

[...]

[...] Preparatory change for the citations in the GUI.

[...]........

[...] r22427 | tlinnet | 2014-03-07 11:42:36 +0100 (Fri, 07 Mar 2014) | 3 lines

[...]

[...] Added lib.rotating_frame module containing functions related to rotating frame NMR calculations.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22428 | tlinnet | 2014-03-07 11:42:43 +0100 (Fri, 07 Mar 2014) | 3 lines

[...]

[...] Added rotating_frame to lib.__init__.py.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22429 | tlinnet | 2014-03-07 11:42:45 +0100 (Fri, 07 Mar 2014) | 3 lines

[...]

[...] Added unittest file lib.test_rotating_frame.py to __init_.py.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22430 | tlinnet | 2014-03-07 11:42:46 +0100 (Fri, 07 Mar 2014) | 6 lines

[...]

[...] Added unittest file _lib.test_rotating_frame().

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]

[...] These unittest will be used to calculate and return dictionaries of tilt_angles, Delta_omega and omega_eff.

[...] Some of the R1rho data mentioned in: http://www.nmr-relax.com/manual/Dispersion_model_summary.html.

[...]........

[...] r22431 | tlinnet | 2014-03-07 11:42:48 +0100 (Fri, 07 Mar 2014) | 3 lines

[...]

[...] Added link to manual for calculating NMR parameters in the doctring for lib.rotating_frame.py.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22432 | tlinnet | 2014-03-07 11:42:50 +0100 (Fri, 07 Mar 2014) | 5 lines

[...]

[...] Renamed function "calc_tilt_angle" to "calc_rotating_frame_params" in lib.rotating_frame.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]

[...] This is to reflect, that the function should return and store spin values of both tilt_angles, Delta_omega and omega_eff.

[...]........

[...] r22433 | tlinnet | 2014-03-07 11:42:51 +0100 (Fri, 07 Mar 2014) | 3 lines

[...]

[...] Replaced with calc_rotating_frame_params in unittest, to reflect function renaming.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22434 | tlinnet | 2014-03-07 11:42:52 +0100 (Fri, 07 Mar 2014) | 3 lines

[...]

[...] Improved docstring in lib.rotating_frame.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22435 | bugman | 2014-03-07 11:51:53 +0100 (Fri, 07 Mar 2014) | 5 lines

[...]

[...] Rearranged the citations in the citations chapter.

[...]

[...] The references for relax are now far more prominent.

[...]........

[...] r22436 | tlinnet | 2014-03-07 13:21:24 +0100 (Fri, 07 Mar 2014) | 3 lines

[...]

[...] Implemented the return of Delta_omega = "average resonance offset in the rotating frame" in specific_analysis.relax_disp.return_offset_data.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22437 | tlinnet | 2014-03-07 13:21:28 +0100 (Fri, 07 Mar 2014) | 3 lines

[...]

[...] Fixed unpacking of return from function calls of return_offset_data.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22438 | tlinnet | 2014-03-07 13:21:30 +0100 (Fri, 07 Mar 2014) | 3 lines

[...]

[...] Made specific_analysis.relax_disp.return_offset_data return "w_eff" - the effective field in rotating frame in rad/s.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22439 | tlinnet | 2014-03-07 13:21:32 +0100 (Fri, 07 Mar 2014) | 3 lines

[...]

[...] Fixed unpacking of return from function calls of return_offset_data, since w_eff is now also returned.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22440 | tlinnet | 2014-03-07 13:21:33 +0100 (Fri, 07 Mar 2014) | 5 lines

[...]

[...] Moved calc_rotating_frame_params() to specific_analysis.relax_disp.disp_data.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]

[...] This is in a response to message: http://www.mail-archive.com/relax-devel@gna.org/msg05080.html.

[...]........

[...] r22441 | tlinnet | 2014-03-07 13:21:35 +0100 (Fri, 07 Mar 2014) | 5 lines

[...]

[...] Started unittest for _specific_analysis._relax_disp.test_disp_data.test_calc_rotating_frame_params.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]

[...] This is in response to message: http://www.mail-archive.com/relax-devel@gna.org/msg05080.html.

[...]........

[...] r22442 | tlinnet | 2014-03-07 13:21:37 +0100 (Fri, 07 Mar 2014) | 5 lines

[...]

[...] Removed lib.test_rotating_frame.py and the associated unittest.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]

[...] This is in response to http://www.mail-archive.com/relax-devel@gna.org/msg05080.html.

[...]........

[...] r22443 | tlinnet | 2014-03-07 14:52:07 +0100 (Fri, 07 Mar 2014) | 3 lines

[...]

[...] Made calc_rotating_frame_params take spin "The spin system specific data container" as input.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22444 | tlinnet | 2014-03-07 14:52:09 +0100 (Fri, 07 Mar 2014) | 3 lines

[...]

[...] Modified calc_rotating_frame_params() to operate on the level of spin container and id.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22445 | tlinnet | 2014-03-07 14:52:10 +0100 (Fri, 07 Mar 2014) | 3 lines

[...]

[...] Modified unittest test_calc_rotating_frame_params to use spin container and id in test.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22446 | bugman | 2014-03-08 15:59:58 +0100 (Sat, 08 Mar 2014) | 3 lines

[...]

[...] Epydoc docstring fix for the Structure.test_bug_21522_master_record_atom_count system test.

[...]

[...] This is for the API documentation at http://www.nmr-relax.com/api/3.1/index.html.

[...]........

[...] r22447 | bugman | 2014-03-08 16:00:00 +0100 (Sat, 08 Mar 2014) | 3 lines

[...]

[...] Epydoc docstring fix for the SetValue() method of the File input GUI element.

[...]

[...] This is for the API documentation at http://www.nmr-relax.com/api/3.1/index.html.

[...]........

[...] r22448 | bugman | 2014-03-08 16:00:02 +0100 (Sat, 08 Mar 2014) | 4 lines

[...]

[...] Removed the test_suite/shared_data directory from the API documentation scanning.

[...]

[...] This is to avoid trying to import the frame order relax scripts which cannot be imported into

[...] Python.

[...]........

[...] r22449 | bugman | 2014-03-08 16:00:04 +0100 (Sat, 08 Mar 2014) | 1 line

[...]

[...] Copyright update.

[...]........

[...] r22450 | tlinnet | 2014-03-12 09:29:15 +0100 (Wed, 12 Mar 2014) | 3 lines

[...]

[...] Added epydoc information about dimensions for w_e in function return_offset_data.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22451 | tlinnet | 2014-03-12 09:29:18 +0100 (Wed, 12 Mar 2014) | 3 lines

[...]

[...] Added verbosity flag to calc_rotating_frame_params() to allow switching of print information.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22452 | tlinnet | 2014-03-12 09:29:20 +0100 (Wed, 12 Mar 2014) | 3 lines

[...]

[...] Added unit test for use of value.write to write theta values calculated from calc_rotating_frame_params().

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22453 | tlinnet | 2014-03-12 10:32:05 +0100 (Wed, 12 Mar 2014) | 3 lines

[...]

[...] Extended unit test for use of value.write to write intensities file. This is to test that changing of the API function will retain its function.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22454 | tlinnet | 2014-03-12 10:32:09 +0100 (Wed, 12 Mar 2014) | 5 lines

[...]

[...] Replaced API function in specific_analysis.relax_disp.api to calculate and return values for parameter theta() when this is requested.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]

[...] Implemented according to http://www.mail-archive.com/relax-devel@gna.org/msg05082.html.

[...]........

[...] r22455 | tlinnet | 2014-03-12 11:16:55 +0100 (Wed, 12 Mar 2014) | 5 lines

[...]

[...] Extendend API function in specific_analysis.relax_disp.api to calculate and return values for parameter theta() when this is requested.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]

[...] Implemented according to http://www.mail-archive.com/relax-devel@gna.org/msg05082.html.

[...]........

[...] r22456 | tlinnet | 2014-03-12 12:04:38 +0100 (Wed, 12 Mar 2014) | 3 lines

[...]

[...] Variable renaming and closing of files in unit test test_value_write_calc_rotating_frame_params().

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22457 | tlinnet | 2014-03-12 12:04:41 +0100 (Wed, 12 Mar 2014) | 3 lines

[...]

[...] Extendend unit test test_value_write_calc_rotating_frame_params() to also test writing of w_eff values.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22458 | tlinnet | 2014-03-12 12:04:44 +0100 (Wed, 12 Mar 2014) | 3 lines

[...]

[...] Fixed typo and removed grace string for parameter description of theta.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22459 | tlinnet | 2014-03-12 12:04:46 +0100 (Wed, 12 Mar 2014) | 3 lines

[...]

[...] Added parameter 'w_eff', the effective field in rotating frame calculation to dispersion API.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22460 | tlinnet | 2014-03-12 12:04:47 +0100 (Wed, 12 Mar 2014) | 3 lines

[...]

[...] Added handling of calculating w_eff in dispersion API.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22461 | tlinnet | 2014-03-12 12:13:09 +0100 (Wed, 12 Mar 2014) | 3 lines

[...]

[...] Added unit to parameter description of theta and w_eff.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22462 | tlinnet | 2014-03-12 13:04:53 +0100 (Wed, 12 Mar 2014) | 3 lines

[...]

[...] Fix for field count and added check for R1rho type in calc_rotating_frame_params().

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22463 | tlinnet | 2014-03-12 13:04:56 +0100 (Wed, 12 Mar 2014) | 3 lines

[...]

[...] Added grace string to parameter description of theta and w_eff.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22464 | tlinnet | 2014-03-12 13:04:58 +0100 (Wed, 12 Mar 2014) | 3 lines

[...]

[...] Fixed code duplication in relax_disp API, for calculation of theta and w_eff.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22465 | tlinnet | 2014-03-12 13:05:00 +0100 (Wed, 12 Mar 2014) | 3 lines

[...]

[...] Removed unused lines of code in unit test test_return_offset_data().

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22466 | tlinnet | 2014-03-12 13:05:03 +0100 (Wed, 12 Mar 2014) | 3 lines

[...]

[...] Moved unit test of value writing of calc_rotating_frame_params() into separete system tests.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22467 | tlinnet | 2014-03-12 16:14:20 +0100 (Wed, 12 Mar 2014) | 5 lines

[...]

[...] Added systemtest Relax_disp.test_value_write_calc_rotating_frame_params_auto_analysis().

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]

[...] This is to test the auto_analysis value.write function to write theta and w_eff values for an R1rho setup.

[...]........

[...] r22468 | tlinnet | 2014-03-12 16:14:23 +0100 (Wed, 12 Mar 2014) | 3 lines

[...]

[...] Added writing of parameters theta and w_eff for an auto-analysis if model in MODEL_LIST_R1RHO_FULL.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22469 | tlinnet | 2014-03-12 16:14:25 +0100 (Wed, 12 Mar 2014) | 3 lines

[...]

[...] Added return of None values for function calc_rotating_frame_params() if spin is not selected.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22470 | tlinnet | 2014-03-12 16:14:27 +0100 (Wed, 12 Mar 2014) | 3 lines

[...]

[...] Extended systemtest Relax_disp.test_value_write_calc_rotating_frame_params_auto_analysis() to test the writing of theta values.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22471 | tlinnet | 2014-03-12 21:25:18 +0100 (Wed, 12 Mar 2014) | 5 lines

[...]

[...] Hardcoded the writing of R2eff as function of the tilt angle Theta, when using the function relax_disp.write_disp_curves().

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]

[...] Theta values per spin will be written if the spin.model is in the list MODEL_LIST_R1RHO_FULL.

[...]........

[...] r22472 | tlinnet | 2014-03-12 21:25:20 +0100 (Wed, 12 Mar 2014) | 3 lines

[...]

[...] Fix for return of None tuble in calc_rotating_frame_params().

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22473 | tlinnet | 2014-03-12 21:25:22 +0100 (Wed, 12 Mar 2014) | 3 lines

[...]

[...] Fix for correct use of assertNotEqual or assertEqual in Relax_disp system tests.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22474 | tlinnet | 2014-03-12 21:51:32 +0100 (Wed, 12 Mar 2014) | 5 lines

[...]

[...] Hardcoded contents of writing of parameters theta and w_eff in systemtest Relax_disp.test_value_write_calc_rotating_frame_params_auto_analysis().

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]

[...] This is to better support testing of key ordering and different architectures, etc.

[...]........

[...] r22475 | tlinnet | 2014-03-13 13:25:41 +0100 (Thu, 13 Mar 2014) | 3 lines

[...]

[...] Fixed code dublication in specific_analysis.relax_disp.disp_data.write_disp_curves().

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22476 | tlinnet | 2014-03-13 13:25:44 +0100 (Thu, 13 Mar 2014) | 3 lines

[...]

[...] Modified systemtest of hardcoded values of theta and w_eff to match precision to 14 digits.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22477 | tlinnet | 2014-03-13 16:57:10 +0100 (Thu, 13 Mar 2014) | 5 lines

[...]

[...] Hardcoded the writing of R2eff as function of the Effective field in rotating frame "w_eff", when using the function relax_disp.write_disp_curves().

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]

[...] Theta values per spin will be written if the spin.model is in the list MODEL_LIST_R1RHO_FULL.

[...]........

[...] r22478 | tlinnet | 2014-03-14 23:21:18 +0100 (Fri, 14 Mar 2014) | 5 lines

[...]

[...] Fix for handling the writing of theta.out and w_eff.out in relax_disp auto_analysis, when model is not of R1rho type.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]

[...] This was discovered using the systemtests.

[...]........

[...] r22479 | tlinnet | 2014-03-14 23:21:20 +0100 (Fri, 14 Mar 2014) | 3 lines

[...]

[...] Removed the writing out of R1rho as function of Effective field w_eff relax_disp.write_disp_curves() as this surves no purpose.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22480 | tlinnet | 2014-03-14 23:21:22 +0100 (Fri, 14 Mar 2014) | 5 lines

[...]

[...] Fix for calculating the theta angle describing the tilted rotating frame relative to the laboratory, when omega1 / Delta_omega is negative.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]

[...] This follows discussion in: http://thread.gmane.org/gmane.science.nmr.relax.devel/5205.

[...]........

[...] r22481 | tlinnet | 2014-03-14 23:21:24 +0100 (Fri, 14 Mar 2014) | 5 lines

[...]

[...] Modified unit and systemtest to reflect new calculation of rotating frame tilt angle Theta.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]

[...] This was discussed in thread: http://thread.gmane.org/gmane.science.nmr.relax.devel/5205.

[...]........

[...] r22482 | tlinnet | 2014-03-14 23:21:26 +0100 (Fri, 14 Mar 2014) | 3 lines

[...]

[...] Added interpolation calculation of theta and w_eff, when dispersion points are interpolated.

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...] r22483 | tlinnet | 2014-03-16 20:13:27 +0100 (Sun, 16 Mar 2014) | 3 lines

[...]

[...] Added print-out of Omega, the average resonance offset, in calc_rotating_frame_params().

[...]

[...] Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs production for R1rho analysis with R2_eff as function of Omega_eff.

[...]........

[...]

[...]

(Browse SVN revision 22503)

Edward d Auvergne <bugman>
Project Administrator
Wed 05 Mar 2014 11:49:02 AM UTC, comment #54:

Dis-regard the last comment, as this is rubbish.

This bug is closed, as the feature wanted is implemented.

The feature which would be requesteded is the possibility to fit R1 values, if such data is not recorded or loaded into relax.

This request will be made in a different support request.

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Mon 03 Mar 2014 12:35:13 PM UTC, comment #53:

This bug is not closed, as an implementation of reading R1rho observed values needs to be possible for values obtained at combinations of spectrometer frequency, spin-lock field strength, nu1 and spin-lock offset.

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Fri 28 Feb 2014 04:39:44 PM UTC, SVN revision 22385:

Added reference data and guess data for a global fit R1rho analysis.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

This system test is setup comparison with paper values, and will be turned off later to prevent long running time.

(Browse SVN revision 22385)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Fri 28 Feb 2014 04:39:42 PM UTC, SVN revision 22384:

Removed systemtest for calc(), since this is only for fixed time experiments.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22384)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Fri 28 Feb 2014 04:39:40 PM UTC, SVN revision 22383:

Sorted the reference values in residue order.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22383)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Fri 28 Feb 2014 01:17:28 PM UTC, SVN revision 22380:

Added system test for R1rho, using calc().

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

This system test will currently fail.

(Browse SVN revision 22380)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Fri 28 Feb 2014 12:26:54 PM UTC, SVN revision 22379:

Replaced "_" with "-" in text file with global fit residues.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22379)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Fri 28 Feb 2014 11:48:54 AM UTC, SVN revision 22378:

Added text file for the articles reference values from the global fit in Relax_disp.test_r1rho_kjaergaard.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

This is from:
Optimisation of the Kjaergaard et al., 2013 Off-resonance R1rho relaxation dispersion experiments using the 'DPL' model.
This uses the data from Kjaergaard's paper at DOI: http://dx.doi.org/10.1021/bi4001062.

(Browse SVN revision 22378)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Fri 28 Feb 2014 11:25:46 AM UTC, SVN revision 22375:

Added text file for which residues was used for global fitting in Relax_disp.test_r1rho_kjaergaard.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

This information is not easily accessible in article or supplementary information.

(Browse SVN revision 22375)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Fri 28 Feb 2014 07:41:11 AM UTC, comment #45:

As all unit and system tests now passes, this bug is closed.

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Fri 28 Feb 2014 07:21:08 AM UTC, SVN revision 22371:

Removed unit test for return_intensity(), since this is no longer in use.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

Reference: http://www.mail-archive.com/relax-devel@gna.org/msg05020.html

(Browse SVN revision 22371)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Fri 28 Feb 2014 07:21:07 AM UTC, SVN revision 22370:

Removed function return_intensity(), as this is no longer in use.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

Reference: http://www.mail-archive.com/relax-devel@gna.org/msg05020.html

(Browse SVN revision 22370)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Fri 28 Feb 2014 07:21:05 AM UTC, SVN revision 22369:

Undo of revision {r22357, r22358, r22360}, as find_intensity_keys() has two return multiple ID's when experiments have been repeated.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

Reference: http://www.mail-archive.com/relax-devel@gna.org/msg05020.html

(Browse SVN revision 22369)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Thu 27 Feb 2014 03:58:10 PM UTC, SVN revision 22368:

Removed functional return of reference intensity in R1rho, since this does not exists.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22368)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Thu 27 Feb 2014 03:58:08 PM UTC, SVN revision 22367:

Added unit test for return_intensity() function for cpmg setup.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22367)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Thu 27 Feb 2014 03:58:06 PM UTC, SVN revision 22366:

Fix for wrong variable spectrometer_frq used instead of frq.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22366)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Thu 27 Feb 2014 03:58:05 PM UTC, SVN revision 22365:

Added offset to be sent to loop_spectrum_ids() function.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22365)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Thu 27 Feb 2014 03:58:03 PM UTC, SVN revision 22364:

Extended return_intensity() unit test to also test for flag ref=True, which return reference intensity instead.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

LONGER MESSAGE

(Browse SVN revision 22364)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Thu 27 Feb 2014 03:58:01 PM UTC, SVN revision 22363:

Added offset to be sent to return_intensity() function.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22363)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Thu 27 Feb 2014 03:07:36 PM UTC, SVN revision 22362:

Fix for wrong use of variable name key and list return from find_intensity_key().

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22362)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Thu 27 Feb 2014 03:07:35 PM UTC, SVN revision 22361:

Added unit test for return_intensity() for a R1rho setup.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22361)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Thu 27 Feb 2014 03:07:34 PM UTC, SVN revision 22360:

Added raising a RelaxError if number of returned IDs from find_intensity_key() is larger than 1.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22360)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Thu 27 Feb 2014 03:07:32 PM UTC, SVN revision 22359:

Parsed offset to find_intensity_key() where such information is available.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22359)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Thu 27 Feb 2014 03:07:31 PM UTC, SVN revision 22358:

Replaced find_intensity_keys() with find_intensity_key() in multiple files.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22358)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Thu 27 Feb 2014 03:07:29 PM UTC, SVN revision 22357:

Renamed find_intensity_keys() function to find_intensity_key() to reflect only returning one spectrum id.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

Implemented as suggested in: http://thread.gmane.org/gmane.science.nmr.relax.devel/5109

(Browse SVN revision 22357)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Thu 27 Feb 2014 11:43:20 AM UTC, SVN revision 22355:

Fixed to send in offset to find_intensity_keys() which allow system test to pass.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

This is the first fix to allow system test to pass: relax -s Relax_disp.test_bug_21344_sparse_time_spinlock_acquired_r1rho_fail_relax_disp
A better solution is described in: http://thread.gmane.org/gmane.science.nmr.relax.devel/5107 which will be implemented.

(Browse SVN revision 22355)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Thu 27 Feb 2014 10:05:59 AM UTC, SVN revision 22354:

Added experiment id to dictionary, where dict() keys are offset_point_time.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22354)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Thu 27 Feb 2014 10:05:57 AM UTC, SVN revision 22353:

Replaced dictionary keys in unit test, to easier access the original data.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22353)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Thu 27 Feb 2014 10:05:56 AM UTC, SVN revision 22352:

Re-created the testing dictionary to easier to convert to collections.OrderedDict() if this can be supported in all relax python versions.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22352)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Thu 27 Feb 2014 08:16:03 AM UTC, SVN revision 22351:

Modified unit test for find_intensity_keys() to simulate method in sim_pack_data().

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22351)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Thu 27 Feb 2014 08:10:32 AM UTC, SVN revision 22350:

Manually reverted the temporary change of r22349 and 22348.

The command used was:

svn merge -r22349:r22347

Reference: http://www.mail-archive.com/relax-devel@gna.org/msg05012.html

------------------------------------------------------------------------
r22349 | tlinnet | 2014-02-26 17:58:34 +0100 (Wed, 26 Feb 2014) | 3 lines

Undo of unintentional adding of code in api.py.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.
------------------------------------------------------------------------
r22348 | tlinnet | 2014-02-26 17:56:16 +0100 (Wed, 26 Feb 2014) | 3 lines

Modified unit test for find_intensity_keys() to simulate method in sim_pack_data().

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.
------------------------------------------------------------------------

(Browse SVN revision 22350)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Wed 26 Feb 2014 04:58:34 PM UTC, SVN revision 22349:

Undo of unintentional adding of code in api.py.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22349)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Wed 26 Feb 2014 04:56:16 PM UTC, SVN revision 22348:

Modified unit test for find_intensity_keys() to simulate method in sim_pack_data().

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22348)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Wed 26 Feb 2014 04:43:22 PM UTC, SVN revision 22347:

Added unit test for find_intensity_keys() in R1rho analysis.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22347)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Wed 26 Feb 2014 04:20:09 PM UTC, comment #20:

Adding 5 spins truncated state file.

(file #20196)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Wed 26 Feb 2014 04:10:34 PM UTC, SVN revision 22346:

Modified unit and system test to use 5 spins truncated state file.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22346)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Wed 26 Feb 2014 04:10:33 PM UTC, SVN revision 22345:

Added 5 spins truncated state file for bug 21344.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22345)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Wed 26 Feb 2014 04:10:31 PM UTC, SVN revision 22344:

Modified system test for setting up R1rho analysis to use truncated spin list with 5 spins.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22344)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Wed 26 Feb 2014 04:10:29 PM UTC, SVN revision 22343:

Added trunkated SeriesTab intensity file for only 5 spins.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22343)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Wed 26 Feb 2014 03:21:12 PM UTC, SVN revision 22342:

Fix for wrong values of "1341.11" in unit test.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

Replaced 1341.10, and 1341.10 with 1341.11.

(Browse SVN revision 22342)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Wed 26 Feb 2014 03:21:11 PM UTC, SVN revision 22341:

Fix for the loop_time function to include point filtering for R1rho experiments.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22341)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Wed 26 Feb 2014 02:53:41 PM UTC, SVN revision 22340:

Expanded unit test for test_loop_time() in R1rho.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22340)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Wed 26 Feb 2014 01:51:56 PM UTC, SVN revision 22339:

Fixes for the wrong use of reading settings file and extracting parameters.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22339)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Wed 26 Feb 2014 01:51:54 PM UTC, SVN revision 22338:

Fix for using a wrong index slicing.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22338)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Wed 26 Feb 2014 01:51:48 PM UTC, SVN revision 22337:

Extended system test to count number of settings iterations and match with len(cdp.exp_type.keys()).

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

There is something wrong, since cdp.exp_type.keys()) is not matching.

(Browse SVN revision 22337)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Wed 26 Feb 2014 01:13:05 PM UTC, SVN revision 22334:

Merged revisions 22317-22333 via svnmerge from
svn+ssh://bugman@svn.gna.org/svn/relax/trunk

........
r22317 | bugman | 2014-02-25 17:54:57 +0100 (Tue, 25 Feb 2014) | 5 lines

Completed the tutorial for using the dispersion analysis in the GUI.

This is for the relaxation dispersion chapter of the manual.
........
r22318 | bugman | 2014-02-25 18:39:33 +0100 (Tue, 25 Feb 2014) | 6 lines

Some edits for the tutorial on using the dispersion GUI analysis.

The results of the relax_disp.insignificance user function are now shown to demonstrate what this
does.
........
r22319 | bugman | 2014-02-25 18:55:25 +0100 (Tue, 25 Feb 2014) | 5 lines

Fixes for some incorrectly reported results in the dispersion GUI tutorial in the manual.

The non-clustered results had been incorrectly copied from the log messages.
........
r22320 | bugman | 2014-02-25 21:58:40 +0100 (Tue, 25 Feb 2014) | 5 lines

More incorrect value fixes for the dispersion GUI tutorial in the manual.

The pA and kex values were also somehow incorrect.
........
r22321 | tlinnet | 2014-02-26 08:36:29 +0100 (Wed, 26 Feb 2014) | 8 lines

Added system test for bug 21344.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

This test will fail with:
No intensity data could be found corresponding to the spectrometer frequency of 799.7773991 MHz, dispersion point of 431.0 and relaxation time of 0.14 s.
Data for a dispersion point of 431.0 and time 0.14 does not exist, and so some of the looping in collecting data for calculation must be wrong.
This behaviour and probably its solution is related to bug 21665, "Running a CPMG analysis with two fields at two delay times" (https://gna.org/bugs/index.php?21665).
........
r22322 | tlinnet | 2014-02-26 10:11:32 +0100 (Wed, 26 Feb 2014) | 3 lines

Renamed previous disp_data unit tests, to reflect they were from a CPMG setup.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.
........
r22323 | tlinnet | 2014-02-26 10:11:35 +0100 (Wed, 26 Feb 2014) | 3 lines

Added unit test for count_relax_times() for and R1rho setup.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

[...]........

[...] r22324 | bugman | 2014-02-26 11:07:26 +0100 (Wed, 26 Feb 2014) | 5 lines

[...]

[...] Fixes for the Grace kex plot for the tutorial for dispersion GUI analysis.

[...]

[...] The values for the Grace plot were not correct.

[...]........

[...] r22325 | tlinnet | 2014-02-26 11:10:18 +0100 (Wed, 26 Feb 2014) | 3 lines

[...]

[...] Added unit test for loop_time() for r1rho setup.

[...]

[...] Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

[...]........

[...] r22326 | tlinnet | 2014-02-26 11:10:23 +0100 (Wed, 26 Feb 2014) | 5 lines

[...]

[...] Renamed system test.

[...]

[...] Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

[...]

[...] The previous test name was rubbish.

[...]........

[...] r22327 | bugman | 2014-02-26 12:03:22 +0100 (Wed, 26 Feb 2014) | 5 lines

[...]

[...] Editing of the dispersion GUI analysis tutorial in the manual.

[...]

[...] The whole section has been proofed and improved.

[...]........

[...] r22328 | bugman | 2014-02-26 12:04:16 +0100 (Wed, 26 Feb 2014) | 5 lines

[...]

[...] The relaxation dispersion auto-analysis now creates the chi2.out text file.

[...]

[...] This is for more easily comparing the chi-squared values between analyses.

[...]........

[...] r22329 | tlinnet | 2014-02-26 12:07:45 +0100 (Wed, 26 Feb 2014) | 3 lines

[...]

[...] Modified Copyright notice in files to reflect svn log.

[...]........

[...] r22330 | bugman | 2014-02-26 13:55:50 +0100 (Wed, 26 Feb 2014) | 3 lines

[...]

[...] A concluding statement has been added to the dispersion GUI analysis tutorial in the manual.

[...]........

[...] r22331 | bugman | 2014-02-26 13:57:26 +0100 (Wed, 26 Feb 2014) | 3 lines

[...]

[...] Added spacing in front of all lstlisting environments in the relaxation dispersion chapter of the manual.

[...]........

[...] r22332 | bugman | 2014-02-26 14:07:57 +0100 (Wed, 26 Feb 2014) | 3 lines

[...]

[...] Spelling fix for the spectrometer frequency checks of the spectrometer.frequency user function.

[...]........

[...] r22333 | bugman | 2014-02-26 14:09:32 +0100 (Wed, 26 Feb 2014) | 3 lines

[...]

[...] Spell checking of the entire relaxation dispersion chapter of the manual.

[...]........

[...]

[...]

(Browse SVN revision 22334)

Edward d Auvergne <bugman>
Project Administrator
Wed 26 Feb 2014 10:10:23 AM UTC, SVN revision 22326:

Renamed system test.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

The previous test name was rubbish.

(Browse SVN revision 22326)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Wed 26 Feb 2014 10:10:19 AM UTC, SVN revision 22325:

Added unit test for loop_time() for r1rho setup.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22325)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Wed 26 Feb 2014 09:11:35 AM UTC, SVN revision 22323:

Added unit test for count_relax_times() for and R1rho setup.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22323)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Wed 26 Feb 2014 09:11:33 AM UTC, SVN revision 22322:

Renamed previous disp_data unit tests, to reflect they were from a CPMG setup.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22322)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Wed 26 Feb 2014 07:36:29 AM UTC, SVN revision 22321:

Added system test for bug 21344.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

This test will fail with:
No intensity data could be found corresponding to the spectrometer frequency of 799.7773991 MHz, dispersion point of 431.0 and relaxation time of 0.14 s.
Data for a dispersion point of 431.0 and time 0.14 does not exist, and so some of the looping in collecting data for calculation must be wrong.
This behaviour and probably its solution is related to bug 21665, "Running a CPMG analysis with two fields at two delay times" (https://gna.org/bugs/index.php?21665).

(Browse SVN revision 22321)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Tue 25 Feb 2014 04:45:38 PM UTC, SVN revision 22316:

Merged revisions 22301-22315 via svnmerge from
svn+ssh://bugman@svn.gna.org/svn/relax/trunk

........
r22301 | tlinnet | 2014-02-25 15:04:49 +0100 (Tue, 25 Feb 2014) | 9 lines

Added exp_type, frq, offset, point to the loop_time() function.

Regarding bug #21665, (https://gna.org/bugs/?21665) - Running a CPMG analysis with two fields at two delay times.

Implemented as suggested in: http://www.mail-archive.com/relax-devel@gna.org/msg04993.html
In all these cases, that information is available, so it should be used.
If one are analysing a combination of data types simultaneously (SQ CPMG, DQ CPMG, R1rho), one will not
have the same relaxation time for each. For different spin-lock or 180 degree pulse offsets and even different dispersion points,
the time may also be different.
........
r22302 | tlinnet | 2014-02-25 15:04:51 +0100 (Tue, 25 Feb 2014) | 6 lines

Made count_relax_times() take optional arguments as: exp_type, frq, offset, point.

Regarding bug #21665, (https://gna.org/bugs/?21665) - Running a CPMG analysis with two fields at two delay times.

This is prepare for re-stricting the looping over time points in the function: loop_time()
This is implemented as suggested in: http://www.mail-archive.com/relax-devel@gna.org/msg04993.html
........
r22303 | tlinnet | 2014-02-25 15:04:53 +0100 (Tue, 25 Feb 2014) | 3 lines

Modified to pass exp_typ, frq, offset or point to loop_time() where such information is available.

Regarding bug #21665, (https://gna.org/bugs/?21665) - Running a CPMG analysis with two fields at two delay times.
........
r22304 | tlinnet | 2014-02-25 15:04:55 +0100 (Tue, 25 Feb 2014) | 5 lines

Added unit test for count_relax_times.

Regarding bug #21665, (https://gna.org/bugs/?21665) - Running a CPMG analysis with two fields at two delay times.

This follows the suggestion in: http://www.mail-archive.com/relax-devel@gna.org/msg04993.html.
........
r22305 | tlinnet | 2014-02-25 15:04:56 +0100 (Tue, 25 Feb 2014) | 3 lines

Added test for return of get_curve_type(), to match 'fixed time'.

Regarding bug #21665, (https://gna.org/bugs/?21665) - Running a CPMG analysis with two fields at two delay times.
........
r22306 | tlinnet | 2014-02-25 15:04:58 +0100 (Tue, 25 Feb 2014) | 3 lines

Added check for return of has_exponential_exp_type to be False.

Regarding bug #21665, (https://gna.org/bugs/?21665) - Running a CPMG analysis with two fields at two delay times.
........

[...] r22307 | tlinnet | 2014-02-25 15:04:59 +0100 (Tue, 25 Feb 2014) | 3 lines

[...]

[...] Added test for the return of get_times().

[...]

[...] Regarding bug #21665, (https://gna.org/bugs/?21665) - Running a CPMG analysis with two fields at two delay times.

[...]........

[...] r22308 | tlinnet | 2014-02-25 15:05:03 +0100 (Tue, 25 Feb 2014) | 3 lines

[...]

[...] Re-ordered unit tests for test of get_curve_type() and has_exponential_exp_type().

[...]

[...] Regarding bug #21665, (https://gna.org/bugs/?21665) - Running a CPMG analysis with two fields at two delay times.

[...]........

[...] r22309 | tlinnet | 2014-02-25 15:05:04 +0100 (Tue, 25 Feb 2014) | 3 lines

[...]

[...] Added the extraction of exp_type and frq from cdp, to be sent into count_relax_times.

[...]

[...] Regarding bug #21665, (https://gna.org/bugs/?21665) - Running a CPMG analysis with two fields at two delay times.

[...]........

[...] r22310 | tlinnet | 2014-02-25 15:05:06 +0100 (Tue, 25 Feb 2014) | 3 lines

[...]

[...] Modified check_exp_type_fixed_time to loop over id's and use count_relax_times for each id.

[...]

[...] Regarding bug #21665, (https://gna.org/bugs/?21665) - Running a CPMG analysis with two fields at two delay times.

[...]........

[...] r22311 | bugman | 2014-02-25 15:42:27 +0100 (Tue, 25 Feb 2014) | 6 lines

[...]

[...] The fetch_docstrings.py script now creates a new LaTeX listing language for relax log messages.

[...]

[...] This is in the script_definitions() method which creates the script_definition.tex file. The idea

[...] is to avoid colouring relax/Python keywords such as 'as', 'from', etc. in the log messages.

[...]........

[...] r22312 | tlinnet | 2014-02-25 16:39:32 +0100 (Tue, 25 Feb 2014) | 3 lines

[...]

[...] Moved the unit test get_times() to its own test.

[...]

[...] Regarding bug #21665, (https://gna.org/bugs/?21665) - Running a CPMG analysis with two fields at two delay times.

[...]........

[...] r22313 | tlinnet | 2014-02-25 16:39:33 +0100 (Tue, 25 Feb 2014) | 3 lines

[...]

[...] Moved the unit test of has_exponential_exp_type() to its own test.

[...]

[...] Regarding bug #21665, (https://gna.org/bugs/?21665) - Running a CPMG analysis with two fields at two delay times.

[...]........

[...] r22314 | tlinnet | 2014-02-25 16:39:35 +0100 (Tue, 25 Feb 2014) | 3 lines

[...]

[...] Moved the unit test get_curve_type() to its own test.

[...]

[...] Regarding bug #21665, (https://gna.org/bugs/?21665) - Running a CPMG analysis with two fields at two delay times.

[...]........

[...] r22315 | tlinnet | 2014-02-25 16:58:36 +0100 (Tue, 25 Feb 2014) | 3 lines

[...]

[...] Added save state for bug 21344.

[...]

[...] Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

[...]........

[...]

[...]

(Browse SVN revision 22316)

Edward d Auvergne <bugman>
Project Administrator
Tue 25 Feb 2014 03:58:37 PM UTC, SVN revision 22315:

Added save state for bug 21344.

Regarding bug #21344, (https://gna.org/bugs/index.php?21344) - Handling of in sparse acquired R1rho dataset with missing combinations of time and spin-lock field strengths.

(Browse SVN revision 22315)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Tue 25 Feb 2014 03:57:53 PM UTC, comment #1:

Save state for bug added.

(file #20184)

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.
Fri 13 Dec 2013 01:36:36 PM UTC, original submission:

This bug relates to the reported error at:
http://thread.gmane.org/gmane.science.nmr.relax.devel/4873

Relax will loop over the defined relaxation times and spin-lock field strengths.

If a combination of a relaxation time and spin-lock field strength is missing, relax will stop the analysis.

A possible solution is sketched here:
http://thread.gmane.org/gmane.science.nmr.relax.devel/4873

A test-suite is prepared.
relax -s Relax_disp.test_r1rho_kjaergaard

Troels E. Linnet <tlinnet>
Project MemberIn charge of this item.

 

(Note: upload size limit is set to 1024 kB, after insertion of the required escape characters.)

Attach File(s):
   
   
Comment:
   

Attached Files
file #20196:  bug_21344_trunc.bz2 added by tlinnet (11kB - application/x-bzip2)
file #20184:  bug_21344.bz2 added by tlinnet (45kB - application/x-bzip2)

 

Depends on the following items: None found

Items that depend on this one: None found

 

Carbon-Copy List
  • -unavailable- added by bugman (Updated the item)
  • -unavailable- added by tlinnet (Submitted the item)
  •  

    Do you think this task is very important?
    If so, you can click here to add your encouragement to it.
    This task has 0 encouragements so far.

    Only logged-in users can vote.

     

    Please enter the title of George Orwell's famous dystopian book (it's a date):

     

     

    Follow 11 latest changes.

    Date Changed By Updated Field Previous Value => Replaced By
    Wed 05 Mar 2014 11:49:02 AM UTCtlinnetStatusIn Progress=>Fixed
      Open/ClosedOpen=>Closed
    Mon 03 Mar 2014 12:35:13 PM UTCtlinnetStatusFixed=>In Progress
      Open/ClosedClosed=>Open
      Release3.1.1=>3.1.6
    Fri 28 Feb 2014 07:41:11 AM UTCtlinnetStatusIn Progress=>Fixed
      Assigned toNone=>tlinnet
      Open/ClosedOpen=>Closed
    Wed 26 Feb 2014 04:20:09 PM UTCtlinnetAttached File-=>Added bug_21344_trunc.bz2, #20196
    Tue 25 Feb 2014 03:57:53 PM UTCtlinnetAttached File-=>Added bug_21344.bz2, #20184
    Tue 04 Feb 2014 05:26:17 PM UTCbugmanSpecific analysis categoryNone=>Relaxation dispersion
    Show feedback again

    Back to the top


    Powered by Savane 3.1-cleanup