Bio++ Program Suite - Bugs: bug #16591, error: ‘writeAlignmentFile’ is... [Gna!]

Bio++ Program Suite - Bugs: bug #16591, error: ‘writeAlignmentFile’ is...

Group

Main
- Main
- View Members
- Search
Homepage
Download
Docs
- Browse
- Submit
- Edit
- Digest
- Export
- Search
Support
- Browse
- Reset to all open ones
- Submit
- Digest
- Export
- View Statistics
- Search
Mailing Lists
Source Code
Bugs
- Browse
- Reset to all open ones
- Submit
- Digest
- Export
- View Statistics
- Search
Tasks
- Browse
- Reset to all open ones
- Submit
- Digest
- Export
- View Statistics
- Search
News
- Browse
- Atom Feed
- Submit
- Manage

Show feedback again

You are not allowed to post comments on this tracker with your current authentification level.

bug #16591: error: ‘writeAlignmentFile’ is not a member of ‘bpp::SequenceApplicationTools’

Submitted by:	Loic Dachary <loic>
Submitted on:	Mon 30 Aug 2010 08:14:25 AM UTC

Category:	None	Severity:	3 - Normal
Priority:	5 - Normal	Status:	None
Privacy:	Public	Assigned to:	None
Open/Closed:	Open

Mon 30 Aug 2010 08:14:25 AM UTC, original submission:

When compiling SVN r158 against

ii libbpp-numcalc 1.8.1 The Bio++ NumCalc library.
ii libbpp-numcalc-dev 1.8.1 The Bio++ NumCalc library development files.
ii libbpp-phyl 1.9.1 The Bio++ Phylogenetic library.
ii libbpp-phyl-dev 1.9.1 The Bio++ Phylogenetic library development files.
ii libbpp-seq 1.7.1 The Bio++ Sequence library.
ii libbpp-seq-dev 1.7.1 The Bio++ Sequence library development files.
ii libbpp-utils 1.5.1 The Bio++ Utils library.
ii libbpp-utils-dev 1.5.1 The Bio++ Utils library development files.

make
[ 10%] Building CXX object bppSuite/CMakeFiles/bppancestor.dir/bppAncestor.cpp.o
/home/loic/Downloads/bpp/bppsuite/bppSuite/bppAncestor.cpp: In function ‘int main(int, char**)’:
/home/loic/Downloads/bpp/bppsuite/bppSuite/bppAncestor.cpp:454: error: ‘writeAlignmentFile’ is not a member of ‘bpp::SequenceApplicationTools’
make[2]: *** [bppSuite/CMakeFiles/bppancestor.dir/bppAncestor.cpp.o] Error 1
make[1]: *** [bppSuite/CMakeFiles/bppancestor.dir/all] Error 2
make: *** [all] Error 2

after checking /usr/include/Seq/SequenceApplicationTools.h it looks like this is relying on a different version of the API.

Loic Dachary <loic>

No files currently attached

Depends on the following items: None found

Items that depend on this one: None found

Carbon-Copy List

-unavailable- added by loic (Submitted the item)

Do you think this task is very important?
If so, you can click here to add your encouragement to it.
This task has 0 encouragements so far.

Only logged-in users can vote.

Please enter the title of George Orwell's famous dystopian book (it's a date):

No Changes Have Been Made to This Item

Show feedback again